How to write a reproducible paper...
the hacker within @ bath
— 2018/11/30
DOI:
10.6084/m9.figshare.7406045
Andrew R. McCluskey
PhD Student @ Dept. Chemistry
arm61@bath.ac.uk
an_drewmcc
arm61.github.io/talks/hackerwithin18
an_drewmcc
these are just my thoughts
an_drewmcc
these are just my thoughts
Hopefully, together we can develop some "recommended guidelines"
James is taking notes and in future might develop a workshop from this
an_drewmcc
why do reproducible research?
Go read
Tania Allard's Pycon talk
an_drewmcc
briefly
Make it easier for yourself in writing the paper with a reproducible workflow
Make it easier for others to reproduce/replicate your analyses, and therefore more likely to cite you
Make it easier for reviewers to understand what you have done, and therefore accept your paper
an_drewmcc
how did I do it?
git
LaTeX
python
make/snakemake
an_drewmcc
the finished product
an_drewmcc
let's get interactive
an_drewmcc
thanks
an_drewmcc
good dogs